Reference

• cellmaps_coembedding package
  • Subpackages
    • cellmaps_coembedding.muse_sc package
      • Submodules
      • cellmaps_coembedding.muse_sc.architecture module
      • cellmaps_coembedding.muse_sc.df_utils module
      • cellmaps_coembedding.muse_sc.file_utils module
      • cellmaps_coembedding.muse_sc.triplet_loss module
      • Module contents
    • cellmaps_coembedding.proteinprojector package
      • Submodules
      • cellmaps_coembedding.proteinprojector.architecture module
      • Module contents
    • cellmaps_coembedding.protein_gps package
      • Submodules
      • cellmaps_coembedding.protein_gps.architecture module
      • Module contents
  • Submodules
  • cellmaps_coembedding.cellmaps_coembeddingcmd module
    • main()
  • cellmaps_coembedding.exceptions module
    • CellmapsCoEmbeddingError
  • cellmaps_coembedding.runner module
    • AutoCoEmbeddingGenerator
    • CellmapsCoEmbedder
      • CellmapsCoEmbedder.generate_readme()
      • CellmapsCoEmbedder.get_coembedding_file()
      • CellmapsCoEmbedder.run()
    • EmbeddingGenerator
      • EmbeddingGenerator.DROPOUT
      • EmbeddingGenerator.JACKKNIFE_PERCENT
      • EmbeddingGenerator.K
      • EmbeddingGenerator.LATENT_DIMENSIONS
      • EmbeddingGenerator.N_EPOCHS
      • EmbeddingGenerator.get_dimensions()
      • EmbeddingGenerator.get_embedding_inputdirs()
      • EmbeddingGenerator.get_next_embedding()
    • FakeCoEmbeddingGenerator
      • FakeCoEmbeddingGenerator.get_next_embedding()
    • MuseCoEmbeddingGenerator
      • MuseCoEmbeddingGenerator.N_EPOCHS_INIT
      • MuseCoEmbeddingGenerator.get_next_embedding()
    • ProMERGECoEmbeddingGenerator
      • ProMERGECoEmbeddingGenerator.get_next_embedding()
    • ProteinGPSCoEmbeddingGenerator
    • ProteinProjectorCoEmbeddingGenerator
      • ProteinProjectorCoEmbeddingGenerator.get_next_embedding()
  • cellmaps_coembedding.utils module
  • Module contents